Jarvis Lab

Transposon Biology

 
 

The maize transposable element Activator (Ac) has been introduced into a variety of heterologous plant hosts lacking well-characterized transposable elements with the aim of developing effective gene tagging systems in those species. Ac has been found to be highly active in a number of species including tobacco and tomato, but shows very much reduced levels of activity in Arabidopsis. The focus of our research has been to use a molecular genetic approach to elucidate the basis for the observed low levels of transposon activity in Arabidopsis. A mutagenesis experiment was undertaken with the aim of identifying host factors responsible for repressing the mobility of Ac (Jarvis et al., 1997, Plant J. 11: 907-919). Seed from a line carrying a single copy of the Ac element inserted into the streptomycin phosphotransferase (SPT) reporter fusion, and which displayed typically low levels of Ac activity (the iae progenitor line), were mutagenized using gamma rays. Nineteen mutants displaying high levels of somatic Ac activity were isolated after screening the M2 generation on streptomycin-containing medium (somatic excision of Ac from the SPT::Ac reporter results in green, antibiotic-resistant sectors; see Figure 5). The mutations were shown to fall into two complementation groups (iae1 and iae2, for increased Ac excision), both loci being unlinked to the SPT::Ac insertion. All of the iae mutations segregate in Mendelian fashion, iae1 mutations being recessive and the single iae2 allele being semi-dominant. The iae1-1 and iae2 mutants show 550- and 70-fold increases, respectively, in the average number of Ac excision sectors per cotyledon. Genetic studies also demonstrated that the effect of the iae1-1 mutation on Ac activity was not restricted to the original SPT::Ac insertion site. The iae mutants thus represent a possible means of improving the efficiency of Ac/Ds transposon tagging systems in Arabidopsis, although data suggest that further optimization will be required: molecular analyses of the iae1-1 mutant confirmed the very high levels of Ac excision predicted using the phenotypic SPT excision assay, but revealed only moderate increases in the number of new Ac insertions.

Figure 5: Variegation Phenotype of the iae1 Mutant

Unpublished data also suggest elevated activity, in the iae1-1 mutant, of an endogenous element (Tag1) and of an additional heterologous element (Tam3), both of which are members of the Ac superfamily of related elements. These data suggest a hypothesis in which the IAE1 locus encodes a specific transposable element repressor, perhaps interacting specifically with Ac-related elements. Molecular characterization of the IAE1 gene should provide a starting point for the dissection of host involvement in Ac transposition, and may begin to elucidate mechanisms employed for controlling transposable element activity in Arabidopsis. So far, detailed molecular analyses of the iae1-1 mutant phenotype have failed to provide conclusive information regarding the basis for the mutant phenotype: i) whereas total Ac transcripts were found to be substantially more abundant in the mutant than in the wild type, the steady-state level of mature message was only moderately elevated (two-fold) as a result of inefficient splicing; ii) methylation of several restriction sites within the Ac sequence was undetectable in both the wild type and the iae1-1 mutant backgrounds; and iii) no differences in chromatin configuration at the Ac element insertion between the wild type and the iae1-1 mutant were detectable (Jarvis et al., 1997, Plant J. 11: 921-931; unpublished data). Thus, in order to reveal the underlying mechanism responsible for the iae1 phenotype, it will be necessary to clone the IAE1 gene. The positional cloning of both IAE loci is currently underway.
 
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Last updated: March 2002
Paul Jarvis
This document has been approved by the head of department or section.